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With the new URL Rewrite feuture, if you have pages that link each other, they will be linked each other when using Freecontent, your sources files are not altered.
You don't have to enter manually every page to Freecontent, just do so for titles that you want show links in Freecontent menu block. In other words, all your old html web site contents can be now showed correctly by just enter the home page in Freecontent menu.
One important thing is that you should place all your files in a "content root dir", the default content root dir is
XOOPS_ROOT_DIR/modules/freecontent/content/, you can change this in the config.php file.
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