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This is more of a core request than a module request.
But it would be nice if modules could be made more hierarchical... When you have 10 or more modules, it kinda gets out of hand. So, one module could be the parent of the other, or something like that.
Also, it would be nice if I could make a module that only had custom HTML on it. Kinda like WF Channel, but I could make as many pages as I want like that, and position them anywhere in the heirarchy (mentioned above).
I think that would make XOOPS much better organized