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Hello:
I had a similar problem while migrating a database, which consists more then 6000+ members profile.
Good news is that after a long delay, I successfully migrated all records from IPB Original to IPBM 1.23 for xoops, developed by kaudanshi.
I modified this script, so that for large database, session timeout shouldnt occur.
Feel free to download this script from
http://www.123ecominfo.com/modules/mydownloads/