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Hi,
better find why the modules are not displayed. There are some common resons for that - 1. you may have a module that is not compatible with your version of XOOPS 2.you have a module that requires something extra to be installed 3.not very shure, but upload with wrong path may cause this too.
In all cases all modules after the problem one will not show. To find the problem module you may try to enable phpdebug mode (try both styles - inline and popup) and look for errors. Ot you can remove all not installed modules and upload them one by one. If the module des not show there is the problem.
You can install modules by typing in your browser addres bar:
http://yoursite/modules/system/admin.php?fct=modulesadmin&op=install&module=newmodule
but better find where the problem is.